Basic HTML Version
Susan R. McCouch & CGSNL (Committee on Gene Symbolization,
Nomenclature and Linkage, Rice Genetics Cooperative), 2008, Gene Nomenclature System for Rice, Rice, 1(1):72-84 (doi:10.1007/s12284-008-9004-9)
1028
就不仅局限到单个的粳稻
(
O. sativa
ssp. Japonica)
和
籼稻
(
O. sativa
ssp.
Indica
)
基因组序列。因此，水稻
基因命名法系统采用了在已知功能基因和计算的
基因模型之间建立一对多的联系的协议，多种类型
的证据来支持每一个水稻
(Oryza)
基因的功能描述。
一个基因可以编码一个蛋白产物
(CDS)
或可以
编码众多非编码
RNA
分子的一种，包括
snoRNA
、
snRNA
、
tRNA
、
rRNA
、
microRNA
、
SiRNA
或
fnRNA
(
功能
RNA)
等。如果在将来有新的基因类别鉴定出
来，我们将增补修订我们的分类系统。
在基因的命名中，英语是首选的，基因符号应
该由拉丁字母和阿拉伯数字组成。基因的名称应该
简要的描述表型和
/
或表达出基因产物功能的一些
意思
(
如果知道的话
)
。所有新基因应该通过
CGSNL
注册和批准，以避免混淆和重复。水稻界一个基因
第一次文献中出现的名称以优先权，但应该认识到
的是名称的改变应该放映新的认识。在这个时间，
我们不赞成采用一个严格或限制性的基因命名法
系统，我们同意采用一个同义名系统，以此使测序
的基因标识符和基于实验确认了生化功能或表型
差异的名称之间建立对应关系。这种方法使得随着
新技术的发展和新认识的积累，水稻基因命名法系
统的持续发展更新成为了可能。
致谢
We kindly acknowledge the following researchers, Pankaj
Jaiswal, Junjian Ni, and Immanuel Yap from the Gramene
database (http://www.gramene.org) and the Department of
Plant Breeding and Genetics at Cornell University, Ithaca, NY,
USA; Toshiro Kinoshita from the Kita 6 Jo, Nishi 18 Chome,
Sapporo 060-0006, Japan; David Mackill and Richard
Bruskiewich from the International Rice Research Institute,
DAPO 7777, Metro Manila, Philippines; C. Robin Buell from
Department of Plant Biology, Michigan State University, East
Lansing, MI 48824-1312, USA; Masahiro Yano, Takeshi Itoh,
and Takuji Sasaki from the Department of Molecular Genetics,
National Institute of Agrobiological Resources, Tsukuba,
Ibaraki 305-8602, Japan; and Qifa Zhang from the National
Key Laboratory of Crop Genetic Improvement, Huazhong
Agricultural University, Wuhan, 430070, People’s Republic of
China for the help in preparing this manuscript and to
numerous other experts for their help and useful suggestions on
improving the rice gene nomenclature. We also thank all the
members of the Rice Genetics Cooperative (RGC: http://
www.shigen.nig.ac.jp/rice/oryzabase/rgn/office.jsp) for their
support. Financial support was provided by NSF Grant DBI
0703908 (Cold Spring Harbor Subcontract 22930113 to Cornell
University).
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