Cotton Genomics and Genetics 2016, Vol.7, No.2, 1-23
22
Continuing Supplementary Table 1
Suvin control vs stress
Small RNA sequence identified in this study
Corresponding conserved
miRNA family (obtained
from miRBase)
Reads (RPKM)*
Differential expression in
fold change#
Suvin-C
Suvin-WS
UCUCGGGCCAGGCUUCAUUCCCS
gma-miR166k
10.79575
9.01315
3.440 down
UCUCUGACCAGGCUUCAUUCCCS
gma-miR166k
7.25377
5.52638
3.311 down
GCGGACCAGGCUUCAUUCCCS
lus-miR166k
5.73355
3.96476
3.407 down
UCGGACCAAGCUUCAUUCCCC
lus-miR166k
9.31627
7.63538
3.206 down
UCGGACUAGGCUUCAUUCCCS
lus-miR166k
9.27674
8.10486
2.253 down
UCAGACCAGGCUUCAUUCCCS
lus-miR166k
6.97728
4.98397
3.981 down
UCGGACCGGGCUUCAUUCCCS
lus-miR166k
11.55803
10.30998
2.375 down
UUCGGACCAGGCUUCACUCCCCS
lus-miR166k
12.04166
10.43305
3.049 down
UCGGACCAGGCAUUCAUUCCCS
ppt-miR166m
11.44909
9.97635
2.775 down
UCGGACCAGGCUCAUUCCCG
ptc-miR166p
10.89145
9.00533
3.696 down
UCGGACCAGGCUCCAUUCCCS
ptc-miR166p
11.33563
10.12476
2.314 down
UGAAGCUGCCAGCAUGAUCUUGA
cpa-miR167c
13.30254
12.07014
2.349 down
UGGAAGCUGCCAGCAUGAUCUGG
nta-miR167c
14.76131
13.62149
2.203 down
UGAAGCUGCCAGCAUGAUCGG
cpa-miR167d
10.66188
8.93551
3.308 down
UGAAGCUGCCAGCAUGAUCUGAG
cpa-miR167d
15.99529
14.31078
3.214 down
UGAAGCUUCCAGCAUGAUCUWG
cpa-miR167d
8.28763
9.45279
2.242 up
GGAUCAUGUGGUAGCUUCACC
stu-miR167d-3p
10.80725
8.18286
6.166 down
AUCAGAUGAAGCUGCCAGCAUGA
gma-miR167i
10.43008
9.42213
2.011 down
GGCAAGUUGUCCUCGGCUACAUU
aly-miR169a-3p
9.648
7.80369
3.590 down
UAGCCAAGAAUGACUUGCCUGC
bdi-miR169d
9.53155
11.93391
5.286 up
UAUUGGCCUGGUUCACUCAGA
stu-miR171c-5p
9.27674
7.5199
3.379 down
AUGAGAAUCUUGAUGAUGCUGCAUC aau-miR172
7.31471
6.00533
2.478 down
ACAUUCAUUGCUGUCGGUGGGU
hhi-miR-181b
8.0397
9.15323
2.163 up
UGACUAGAUCCACACUCAUCCA
hme-miR-279a
11.79459
6.45279
40.554 down
AGAGCUUUCUUCAGUCCACUCU
mtr-miR319d-5p
7.94659
6.67518
2.413 down
