Molecular Plant Breeding 2016, Vol.7, No.12, 1
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Table 2 Digenic epistasis identified for rice grain size related traits in Ce253/NYZ F2 population
Trai
tID
TraitNa
me
Chromos
ome1
Positi
on1
Marker
interval
QT
L
a
Chromos
ome2
Positio
n2
Marker
interval
QTL
a
LO
D
PVE(
%)
b
A1
c
A2
c
D1
d
D2
d
AA
e
AD
f
DA
g
1
GL
4
35
M038-04M23
.61
10
85
RM25539-M
098
5.17 30.06
-0.3
21
0.093
0.101
3
0.12
75
0.164
5
0.78
24
-0.245
4
1
GL
10
45
10M12.66-R
M25425
11
95
11M11.16-11
M20.77
5.84 30.99
-0.0
19
-0.074
4
0.396
4
0.31
6
0.261
9
-0.07
17
0.593
9
1
GL
6
0
RM19234-6
M4.57
12
35
M04442-12M
13.05
5.36 12.42
0.24
74
0.044
8
-0.31
34
-0.13
96
0.037
9
-0.41
94
-0.308
4
1
GL
8
75
RM8271-RM
23469
12
85
M110-12M27
.47
h
qLWR-
12
6.04 34.17
-0.0
96
-0.477
6
0.315
4
-0.08
35
0.026
0.17
28
1.059
8
1
GL
7
125
M070-M063
12
95
M110-12M27
.47
h
qLWR-
12
5.29 46.17
-0.1
29
0.543
6
-0.21
08
-0.20
78
-0.18
79
0.07
91
-1.160
9
2
GW
1
135
M008-RM11
258
h
qGL
-1
2
155
02M11.16-M
018
5.58 24.61
-3E-
04
-0.133
1
-0.02
58
-0.01
76
0.182
8
-0.04
45
0.229
2
2
GW
7
0
RM21309-07
M20.11
8
85
RM8271-RM
23469
6.38 17.53
-0.0
21
0.011
4
-0.04
47
-0.13
12
-0.11
74
0.15
18
-0.008
5
2
GW
1
30
M001-M004
8
160
08M21.03-08
M25.57
5.08 41.88
0.10
66
0.013
3
-0.33
11
-0.48
14
0.045
2
-0.22
54
0.003
2
GW
9
10
09M22.81-R
M201
11
40
M04308-M10
1
5.86 16.41
0.01
7
-0.115
4
0.088
2
-0.00
18
0.128
7
-0.02
15
0.177
8
2
GW
6
55
6M4.57-M05
1
11
50
M101-11M11
.16
5.28 23.23
0.07
21
-0.188
0.125
9
0.10
64
-0.10
49
-0.03
39
0.253
2
GW
2
240
M20-RM250
12
110
M110-12M27
.47
h
qLWR-
12
5.87 27.85
-0.0
57
-0.073
3
0.085
7
0.07
27
0.007
0.23
99
0.264
3
3
GT
1
25
M001-M004
2
185
RM1211-RM
13429
5.70 21.28
-0.0
98
-0.110
6
0.105
1
0.03
8
-0.13
05
0.07
85
0.149
3
3
GT
1
155
RM488-M01
2
3
140
RM5488-RM
15247
6.22 21.92
0.07
32
-0.065
8
0.057
2
0.05
83
0.036
4
-0.11
25
0.052
8
3
GT
3
205
03M10.75-03
M6.79
4
80
RM16943-M
09496
h
qGL-4
6.61 21.82
-0.1
01
-0.056
0.066
7
0.08
06
-0.07
1
0.15
4
0.059
2
3
GT
3
150
RM15247-R
M6929
5
150
M040-M0966
8
h
qTGW
-5
5.01 30.27
-0.0
11
0.051
4
-0.03
87
-0.09
32
-0.00
83
-0.04
59
-0.069
2
