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Computational Molecular Biology 2014, Vol. 4, No. 8, 1-3
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Table 1 Sequences used for phylogenic analysis identified by region and specie
S/N
Accession number
Location
Host
Base pairs
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
FJ228677.1
FJ228678.1
FJ228681.1
FJ228683.1
EU038108.1
EU038106.1
EU038105.1
EU038103.1
HM368163.1
HM368162.1
HM368160.1
FJ545679.1
FJ545678.1
FJ545674.1
KC791905.1
KC791852.1
DQ105964.1
DQ105963.1
AY654585.1
JN106463.1
AY233451.1
AY233450.1
Texas
-Texas
Texas
Texas
Nigeria
Nigeria
Nigeria
Nigeria
Ghana
Ghana
Ghana
Niger
Niger
Niger
Wolf
Wolf
Cow
Dog
Dog
Dog
Dog
Dog
Fox
Fox
Fox
Fox
Dog
Dog
Dog
Dog
Cat
Dog
Dog
Dog
Dog
Dog
Pakistan
Pakistan
India
India
Brazil
Brazil
Argentina
ARgentina
264
264
264
264
1350
1350
1350
1350
405
405
405
1575
1575
1575
1572
1572
446
446
320
320
320
320
Table 2 Estimates of Evolutionary Divergence between Sequences
Fox Texas Dog
Nigeria
Cat Ghana Dog
Ghana
Dog Niger Wolf
Pakistan
Cow India Dog India Dog
Brazil
Dog
Argentina
Fox Texas -
Dog
Nigeria
.605
(.030)
-
Cat
Ghana
.590(.029) .130(.020) -
Dog
Ghana
.590(.029) .130(.020) .000
-
Dog
Niger
.670(.029) .613(.029) .613(.029) .613(.029) -
Wolf
Pakistan
.682(.029) .613(.020) .605(.029) .605(.029) .146(.023) -
Cow
India
.594(030) .165(.022) .149(.022) .149(.022) .617(.029) .609(.031) -
Dog India ..613(.030) .069(.015) .107(.019) .107(.019) .628(.029) .625(.030) .146(.021) -
Dog
Brazil
.192(.025) .594(.029) .586(.029) .586(.029) .621(.030) .617.030) .605(.030) .617(.030) -
Dog
Argentina
.146(,022) .613(029) .594(.029) .594(.029) .678(.029) .655(.030) .598(.020) .625(.029) .150(.024) -
Note: The number of base differences per site from between sequences are shown with Standard error estimate(s). The analysis
involved 10 nucleotide sequences. Codon positions included were 1st+2nd+3rd+Noncoding. All positions containing gaps and
missing data were eliminated. There were a total of 261 positions in the final dataset. Evolutionary analyses were conducted in
MEGA5 (Tamura et al., 2011)