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Supplementary Table 2 Details of consensus wheat chromosome bins containing high number of ESTs showing homology with
brachypodium
Consensus bin
Fraction length
Average physical length of bin
*
No. of EST
O/E
***
Observed (O)
Expected (E)
**
WC1S, 0.86
-
1.06
0.14
0.62
25
10.0
2.50
WC1S, 0.47
-
0.48
0.01
0.04
8
0.7
11.19
WC1L, 0.17
-
0.18
0.01
0.06
4
1.0
4.10
WC1L, 0.41
-
0.47
0.06
0.36
21
5.9
3.59
WC1L, 0.47
-
0.61
0.14
0.84
39
13.7
2.86
WC1L, 0.61
-
0.69
0.08
0.48
18
7.8
2.31
WC2S, 0.78
-
0.84
0.06
0.31
10
5.6
1.78
WC2S, 0.47
-
0.53
0.06
0.31
15
5.6
2.67
WC2L, 0.49
-
0.50
0.01
0.07
48
1.3
37.91
WC2L, 0.76
-
0.85
0.09
0.59
15
10.7
1.41
WC2L, 0.89
-
1.00
0.11
0.73
18
13.2
1.36
WC3S, 0.57
-
0.78
0.21
1.20
22
14.9
1.48
WC3S, 0.55
-
0.57
0.02
0.11
2
1.4
1.41
WC3S, 0.45
-
0.55
0.10
0.57
15
7.1
2.12
WC3S, 0.24
-
0.33
0.09
0.51
10
6.4
1.57
WC3L, C
-
0.22
0.22
1.39
23
17.2
1.33
WC3L, 0.50
-
0.63
0.13
0.82
16
10.2
1.57
WC3L, 0.78
-
0.81
0.03
0.19
21
2.4
8.94
WC3L, 0.81
-
1.00
0.19
1.20
31
14.9
2.08
WC4S, 0.67
-
0.82
0.15
0.73
19
11.0
1.72
WC4S, 0.66
-
0.67
0.01
0.05
3
0.7
4.08
WC4S, 0.53
-
0.57
0.04
0.19
4
2.9
1.36
WC4S, 0.37
-
0.43
0.06
0.29
5
4.4
1.13
WC4L, 0.20
-
0.31
0.11
0.65
25
9.8
2.54
WC4L, 0.63
-
0.71
0.08
0.47
8
7.2
1.12
WC4L, 0.71
-
0.76
0.05
0.30
23
4.5
5.14
WC4L, 0.76
-
0.86
0.10
0.59
14
9.0
1.56
WC5S, 0.78
-
0.81
0.03
0.14
6
3.3
1.83
WC5S, 0.43
-
0.56
0.13
0.62
21
14.2
1.48
WC5L, 0.55
-
0.57
0.02
0.13
59
3.0
19.61
WC5L, 0.57
-
0.60
0.03
0.20
6
4.5
1.33
WC5L, 0.74
-
0.76
0.02
0.13
5
3.0
1.66
WC5L, 0.76
-
0.78
0.02
0.13
29
3.0
9.64
WC5L, 0.78
-
0.79
0.01
0.07
10
1.5
6.65
WC5L, 0.79
-
0.87
0.08
0.52
39
12.0
3.24
WC6S, 0.99
-
1.00
0.01
0.11
6
0.9
6.33
WC6S, 0.76
-
0.79
0.03
0.32
13
2.8
4.58
WC6L, 0.29
-
0.36
0.07
0.77
17
6.9
2.47
WC6L, 0.36
-
0.40
0.04
0.44
9
3.9
2.29
WC6L, 0.55
-
0.68
0.13
1.43
25
12.8
1.96
WC6L, 0.74
-
0.80
0.06
0.66
16
5.9
2.71
WC6L, 0.90
-
1.00
0.10
1.10
27
9.8
2.75
WC7S, 0.59
-
0.61
0.02
0.23
16
1.8
9.04
WC7S, 0.45
-
0.59
0.14
1.61
15
12.4
1.21
WC7S, 0.36
-
0.45
0.09
1.04
18
8.0
2.26
WC7L, 0.61-0.63
0.02
0.22
14
1.7
8.19
WC7L, 0.71
-
0.74
0.03
0.33
4
2.6
1.56
WC7L, 0.78
-
0.82
0.04
0.44
9
3.4
2.63
WC7L, 0.82
-
0.86
0.04
0.44
5
3.4
1.46
WC7L, 0.86
-
0.90
0.04
0.44
10
3.4
2.93
WC7L, 0.90
-
1.00
0.10
1.11
11
8.5
1.29
Note: S represents short arm; L represents long arm; *: From Gill et al. (1991); **: Number of ESTs based on the physical size of the
bin; ***: Observed vs. expected number of ESTs