Page 33 - Triticeae Genomics and Genetics

Supplementary Table 1d Details of the homoeologous group 4 consensus chromosome. The consensus chromosome on the right is
composed of only ESTs those were mapped exclusively to individual chromosome of homoeologous group 4, and showing homology
with brachypodium chromosomes (Bd). Within consensus chromosome, different colours reflect different consensus bins, end point
of consensus bins are designated by their proprtional fraction length (FL) from centromere
wEST Id 4A 4B 4D Bd Start on Bd End on Bd Consensus FL
BF482960 4AL13-0.59-0.66 4BS1-0.81-1.00 4DS3-0.67-1.00* 1 8032805 8034491 1.00
BG604678 4AL13-0.59-0.66 … 4DS2-0.82-1.00 1 8233377 8235145
BF484783 4AL13-0.59-0.66 4BS1-0.81-1.00 … 1 8903039 8904678
BF478955 4AL13-0.59-0.66 … 4DS2-0.82-1.00 1 9103266 9103379
BG274115 4AL13-0.59-0.66 4BS1-0.81-1.00 4DS2-0.82-1.00 1 9470123 9470546
BE489555 4AL13-0.59-0.66 4BS1-0.81-1.00 4DS2-0.82-1.00 1 9813074 9813358
BG262757 4AL13-0.59-0.66 … 4DS2-0.82-1.00 1 17354303 17356055
BE494051 4AL13-0.59-0.66 4BS1-0.81-1.00 … 4 22960687 22961676
BE637594 4AL13-0.59-0.66 … 4DS2-0.82-1.00 4 37638305 37639209 0.82
BF200816 4AL12-0.43-0.59 … 4DS2-0.82-1.00 1 5090189 5090450
NSF17027 4AL12-0.43-0.59 4BS1-0.81-1.00 4DS2-0.82-1.00 1 6794643 6797009
BE403913 4AL12-0.43-0.59 4BS1-0.81-1.00 4DS2-0.82-1.00 1 6819390 6819683
BI479208 … 4BS1-0.81-1.00 4DS2-0.82-1.00 1 6829113 6830068
NSF18176 4AL12-0.43-0.59 … 4DS2-0.82-1.00 1 7319078 7321610
NSF16480 4AL12-0.43-0.59 4BS1-0.81-1.00 4DS2-0.82-1.00 1 7319931 7321599
BF482950 … 4BS1-0.81-1.00 4DS2-0.82-1.00 1 7356024 7357365
BF478437 4AL12-0.43-0.59 4BS1-0.81-1.00 4DS2-0.82-1.00 1 7417193 7418993
NSF18589 4AL12-0.43-0.59 4BS1-0.81-1.00 4DS2-0.82-1.00 1 7691824 7693592
BF428613 4AL12-0.43-0.59 … 4DS2-0.82-1.00 1 7703548 7703964
BG262940 4AL12-0.43-0.59 … 4DS2-0.82-1.00 1 8487878 8488727
BE405592 … 4BS1-0.81-1.00 4DS2-0.82-1.00 1 8858800 8859284
BG262703 … 4BS1-0.81-1.00 4DS3-0.67-1.00* 1 9457916 9458406
BF291316 … 4BS1-0.81-1.00 4DS2-0.82-1.00 1 11190434 11189723
BE406462 … 4BS1-0.81-1.00 4DS2-0.82-1.00 1 11198438 11198789
BE604835 4AL12-0.43-0.59 … 4DS2-0.82-1.00 1 11213919 11214025
BE591150 4AL12-0.43-0.59 4BS1-0.81-1.00 4DS2-0.82-1.00 1 11299334 11300126
BE403860 4AL12-0.43-0.59 4BS1-0.81-1.00 4DS2-0.82-1.00 1 28086596 28088710
BE406616 4AL12-0.43-0.59 4BS1-0.81-1.00 4DS2-0.82-1.00 4 28764280 28764530 0.67
NSF18378 4AL12-0.43-0.59 4BS8-0.57-0.81 4DS2-0.82-1.00 1 5724868 5726325
BF474165 … 4BS8-0.57-0.81 4DS2-0.82-1.00 4 12616129 12616666
BE405350 4AL12-0.43-0.59 4BS8-0.57-0.81 4DS2-0.82-1.00 5 25568037 25568632 0.66
BE406875 4AL12-0.43-0.59 4BS8-0.57-0.81 … 5 19299686 19300474
BE637573 4AL12-0.43-0.59 … 4DS3-0.67-0.82 1 24263478 24265116
BF200779 4AL12-0.43-0.59 … 4DS3-0.67-0.82 1 28083331 28083454
BE443232 … 4BS8-0.57-0.81 4DS3-0.67-0.82 1 29623948 29624569
BE471250 4AL12-0.43-0.59 … 4DS3-0.67-0.82 3 33284311 33284868 0.57
BF484181 4AL12-0.43-0.59 … 4DS1-0.53-0.67 5 19930187 19930298
BG605249 4AL12-0.43-0.59 … 4DS1-0.53-0.67 1 29541570 29541879
BE446231 4AL12-0.43-0.59 … 4DS1-0.53-0.67 1 30281523 30281854
BF145360 4AL12-0.43-0.59 4BS4-0.37-0.57 … 1 31245303 31246661 0.53
BG275006 C-4AL12-0.43 4BS4-0.37-0.57 4DS1-0.53-0.67 1 29885362 29886772
BF292960 C-4AL12-0.43 4BS4-0.37-0.57 4DS1-0.53-0.67 1 31518858 31519421 0.43
BE406580 C-4AL12-0.43 4BS4-0.37-0.57 C-4DS1-0.53 4 8387525 8388047
BE444858 … 4BS4-0.37-0.57 C-4DS1-0.53 1 10423531 10424398
BE444858 … 4BS4-0.37-0.57 C-4DS1-0.53 4 10423531 10424398
BF291753 C-4AL12-0.43 … C-4DS1-0.53 1 12286065 12286857
BE403622 C-4AL12-0.43 4BS4-0.37-0.57 C-4DS1-0.53 3 14397465 14399405
BE406618 C-4AL12-0.43 4BS4-0.37-0.57 C-4DS1-0.53 1 18518482 18520299 0.37
BE399282 C-4AL12-0.43 C-4BS4-0.37 … 1 7318943 7319269
BE517645 C-4AL12-0.43 … C-4DS1-0.53 4 9393344 9393809
BE500311 … C-4BS4-0.37 C-4DS1-0.53 1 10222070 10222820