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Supplementary Table 1b Details of the homoeologous group 2 consensus chromosome. The consensus chromosome on the right is
composed of only ESTs those were mapped exclusively to individual chromosome of homoeologous group 2, and showing homology
with brachypodium chromosomes (Bd). Within consensus chromosome, different colours reflect different consensus bins, end point
of consensus bins are designated by their proprtional fraction length (FL) from centromere
wEST Id
2A
2B
2D
Bd Start on Bd End on Bd
Consensus
FL
BE498111
2AS5-0.78-1.00
2BS3-0.84-1.00
2DS5-0.47-1.00
5
940168
940598
1.00
BE591555
2AS5-0.78-1.00
2BS3-0.84-1.00
2DS5-0.47-1.00
5
2040813
2041209
BE498396
2AS5-0.78-1.00
2BS3-0.84-1.00
2DS5-0.47-1.00
5
2044801
2047052
BF202540
2AS5-0.78-1.00
2BS3-0.84-1.00
2DS5-0.47-1.00
5
2518481
2520077
NSF18601
2AS5-0.78-1.00
2BS3-0.84-1.00
2DS5-0.47-1.00
5
3146555
3151432
BF474028
...
2BS3-0.84-1.00
2DS5-0.47-1.00
5
4345297
4349795
BE494450
2AS5-0.78-1.00
2BS3-0.84-1.00
...
5
5280260
5280384
BG263347 2AS5-0.78-1.00
2BS3-0.84-1.00
2DS
5
5762824
5763562
BE591604
2AS5-0.78-1.00
2BS3-0.84-1.00
2DS
2
11314038
11314826
BG274643 ...
2BS3-0.84-1.00
2DS5-0.47-1.00
1
13341931
13342450
BG274878 ...
2BS3-0.84-1.00
2DS5-0.47-1.00
1
19220788
19221890
BF291648
...
2BS3-0.84-1.00
2DS5-0.47-1.00
1
20928809
20930387
BE443747
2AS5-0.78-1.00
2BS3-0.84-1.00
2DS5-0.47-1.00
2
52903374
52904047
BE604911
...
2BS3-0.84-1.00
2DS5-0.47-1.00
2
56507818
56508248
NSF16454
2AS5-0.78-1.00
...
2DS5-0.47-1.00 5
1398185
1401551
0.84
BG263447 2AS5-0.78-1.00
...
2DS5-0.47-1.00
5
1759893
1760633
BG275030 2AS5-0.78-1.00
2BS4-0.75-0.84
2DS5-0.47-1.00
1
13396915
13398393
BG604518 2AS5-0.78-1.00
2BS4-0.75-0.84
2DS5-0.47-1.00
1
13433018
13433139
BF146221
2AS5-0.78-1.00
2BS4-0.75-0.84
2DS5-0.47-1.00
1
13467514
13467797
BF428609
2AS5-0.78-1.00
...
2DS5-0.47-1.00
1
15216882
15217711
BF201442
2AS5-0.78-1.00
...
2DS5-0.47-1.00
1
15752104
15752548
BF293115
2AS5-0.78-1.00
2BS4-0.75-0.84
...
4
18346970
18347384
BE403860
2AS5-0.78-1.00
...
2DS5-0.47-1.00
1
28086596
28088710
BG604397 2AS5-0.78-1.00
...
2DS5-0.47-1.00
1
51882391
51882534
BE636951
...
2BS4-0.75-0.84
2DS5-0.47-1.00
5
10858012
10858244
0.78
BF484399
...
2BS1-0.53-0.75
2DS5-0.47-1.00
4
7161148
7161685
0.75
BF202468
2AS5-0.78-1.00
2BS1-0.53-0.75
2DS5-0.47-1.00
1
13816037
13816888
NSF17493
2AS5-0.78-1.00
2BS1-0.53-0.75
2DS5-0.47-1.00 1
14445142
14446752
BF478837
C-2AS5-0.78
2BS1-0.53-0.75
2DS5-0.47-1.00
1
14613134
14614242
BE406474
2AS5-0.78-1.00
2BS1-0.53-0.75
2DS5-0.47-1.00
1
14646554
14646815
BE604844
...
2BS1-0.53-0.75
2DS5-0.47-1.00
1
15195675
15196803
BE497494
2AS5-0.78-1.00
2BS1-0.53-0.75
2DS5-0.47-1.00
1
15295372
15295916
BE445628
2AS5-0.78-1.00
2BS1-0.53-0.75
2DS5-0.47-1.00
1
15307203
15307713
BE443026
2AS5-0.78-1.00
2BS1-0.53-0.75
2DS5-0.47-1.00
1
15414213
15415648
BE499671
2AS5-0.78-1.00
2BS1-0.53-0.75
2DS5-0.47-1.00
1
15698301
15698783
BE499478
2AS5-0.78-1.00
2BS1-0.53-0.75
2DS5-0.47-1.00
1
15743237
15743908
BE498254
2AS5-0.78-1.00
2BS1-0.53-0.75
2DS5-0.47-1.00
1
16217490
16218880
BF201533
...
2BS1-0.53-0.75
2DS5-0.47-1.00
1
16230432
16231217
BQ294702 2AS5-0.78-1.00
2BS1-0.53-0.75
2DS5-0.47-1.00
1
16308941
16309655
BE494262
2AS5-0.78-1.00
2BS1-0.53-0.75
2DS5-0.47-1.00
1
16493958
16496209
BE446480
...
2BS1-0.53-0.75
2DS1-0.33-1.00* 1
16675531
16677487
BG314234 2AS5-0.78-1.00
2BS1-0.53-0.75
2DS5-0.47-1.00
1
16678403
16680289
BE406616
2AS5-0.78-1.00
2BS1-0.53-0.75
2DS5-0.47-1.00
4
28764280
28764530
BE590566
...
2BS1-0.53-0.75
2DS5-0.47-1.00
4
43887471
43890900
BF145633
...
2BS1-0.53-0.75
2DS5-0.47-1.00
3
52717972
52718417
BE498371
...
2BS1-0.53-0.75
2DS5-0.47-1.00
2
53941858
53942428
BE496951
C-2AS5-0.78
2BS3-0.84-1.00
2DS5-0.47-1.00
4
7941387
7942035
0.53