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Molecular Pathogens 
MP2011, Vol.2, No.1
http://mp.sophiapublisher.com
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Figure 4 Alignment of the nucleotide sequence of 5´
-
UTR
Note: A: Alignment of partial sequences of S-fragment of FMDV; B: Alignment of the predicted PK structure region sequences of
-
end of Poly C tract of FMDV; Under line indicated the position of each PK
Figure 5 Comparison of three major antigenicity sites of VP1 protein coding region from the O/YM/YN/2000 and 11 reference
strains
Note: With the RGD motif indicated with boldface letters. The number represents the amino acid position, the conserved residues
were indicated by dots
between the FMDV genomes are often manifest in
differences of biology and pathogenicity. In this paper,
we determined and analyzed whole genome sequence
of O/YM/YN/2000 strain., those data, together with
the previous research information about biological and
immunological characteristics of the tested isolate,
might provide a scientific basic knowledge for
selecting swine FMD serotype O vaccine candidate to