Plant Gene and Traits 2024, Vol.15, No.4, 184-194 http://genbreedpublisher.com/index.php/pgt 192 Dalai D., Chakraborti M., Mondal T., Ray S., Kar M., Chakraborty K., Pani D., Sarkar S., Bose L., Behera M., Chattopadhyay K., Deepa, Vijayan J., Dash S., Pradhan C., Patra B., and Marndi B., 2021, The core set of sequence-tagged microsatellite sites markers between halophytic wild rice Oryza coarctata and Oryza sativacomplex, Euphytica, 217: 57. https://doi.org/10.1007/s10681-021-02790-3 Davey J., Hohenlohe P., Etter P., Boone J., Catchen J., and Blaxter M., 2011, Genome-wide genetic marker discovery and genotyping using next-generation sequencing, Nature Reviews Genetics, 12: 499-510. https://doi.org/10.1038/nrg3012 PMid:21681211 Dijk E., Auger H., Jaszczyszyn Y., and Thermes C., 2014, Ten years of next-generation sequencing technology, Trends in Genetics, 30(9): 418-426. https://doi.org/10.1016/j.tig.2014.07.001 PMid:25108476 Duhan N., Kaur S., and Kaundal R., 2023, ranchSATdb: a genome-wide simple sequence repeat (SSR) markers database of livestock species for mutant germplasm characterization and improving farm animal health, Genes, 14(7): 1481. https://doi.org/10.3390/genes14071481 PMid:37510385 PMCid:PMC10378808 Fang S., Eu T., and Chung M., 2011, Isolation and characterization of genome-specific markers in Oryza species with the BB genome, Plant Science, 181(3): 300-308. https://doi.org/10.1016/j.plantsci.2011.06.004 PMid:21763541 Ganie S., and Mondal T., 2015, Genome-wide development of novel miRNA-based microsatellite markers of rice (Oryza sativa) for genotyping applications, Molecular Breeding, 35: 51. https://doi.org/10.1007/s11032-015-0207-7 Gong L., Stift A., Kofler A., Pachner A., and Lelley A., 2008, Microsatellites for the genus Cucurbita and an SSR-based genetic linkage map of Cucurbita pepo L., Theoretical and Applied Genetics, 117: 37-48. https://doi.org/10.1007/s00122-008-0750-2 PMid:18379753 PMCid:PMC2413107 Gouda A., Warburton M., Djedatin G., Kpeki S., Wambugu P., Gnikoua K., and Ndjiondjop M., 2021, Development and validation of diagnostic SNP markers for quality control genotyping in a collection of four rice (Oryza) species, Scientific Reports, 11: 18617. https://doi.org/10.1038/s41598-021-97689-3 PMid:34545105 PMCid:PMC8452751 Grover A., and Sharma P., 2016, Development and use of molecular markers: past and present, Critical Reviews in Biotechnology, 36: 290-302. https://doi.org/10.3109/07388551.2014.959891 PMid:25430893 Hancock-Hanser B., Frey A., Leslie M., Dutton P., Archer F., and Morin P., 2013, Targeted multiplex next‐generation sequencing: advances in techniques of mitochondrial and nuclear DNA sequencing for population genomics, Molecular Ecology Resources, 13(2): 254-268. https://doi.org/10.1111/1755-0998.12059 PMid:23351075 Hechanova S., Bhattarai K., Simon E., Clave G., Karunarathne P., Ahn E., Li C., Lee J., Kohli A., Hamilton N., Hernandez J., Gregorio G., Jena K., An G., and Kim S., 2021, Development of a genome-wide InDel marker set for allele discrimination between rice (Oryza sativa) and the other seven AA-genome Oryza species, Scientific Reports, 11: 8962. https://doi.org/10.1038/s41598-021-88533-9 PMid:33903715 PMCid:PMC8076200 Joshi S., Gupta V., Aggarwal R., Ranjekar P., and Brar D., 2000, Genetic diversity and phylogenetic relationship as revealed by inter simple sequence repeat (ISSR) polymorphism in the genus Oryza, Theoretical and Applied Genetics, 100: 1311-1320. https://doi.org/10.1007/s001220051440 Kalia R., Rai M., Kalia S., Singh R., and Dhawan A., 2011, Microsatellite markers: an overview of the recent progress in plants, Euphytica, 177: 309-334. https://doi.org/10.1007/s10681-010-0286-9 Kumar R., Kumar C., Paliwal R., Choudhury D., Singh I., Kumar A., Kumari A., and Singh R., 2020, Development of novel genomic simple sequence repeat (g-SSR) markers and their validation for genetic diversity analyses in kalmegh [Andrographis paniculata (Burm. F.) Nees], Plants, 9(12): 1734. https://doi.org/10.3390/plants9121734 PMid:33316874 PMCid:PMC7763852 Leisen T., Bietz F., Werner J., Wegner A., Schaffrath U., Scheuring D., Willmund F., Mosbach A., Scalliet G., and Hahn M., 2020, CRISPR/Cas with ribonucleoprotein complexes and transiently selected telomere vectors allows highly efficient marker-free and multiple genome editing in Botrytis cinerea, PLoS Pathogens, 16(8): e1008326. https://doi.org/10.1371/journal.ppat.1008326 PMid:32804988 PMCid:PMC7451986
RkJQdWJsaXNoZXIy MjQ4ODYzMg==