Molecular Plant Breeding 2024, Vol.15, No.5, 220-232 http://genbreedpublisher.com/index.php/mpb 230 Acknowledgments We would like to extend our sincere gratitude to the two anonymous peer reviewers for their participation in the review of this paper. Their thorough review of the content, professional feedback, and constructive criticism have made significant contributions to the improvement of this study. Funding This work was jointly supported by the Science and Technology Development of Jilin Province (QTL Mapping of Maize Resistance to Ear Rot Based on SNP Markers and Breeding of New High-Yield, Disease-Resistant, and Machine-Harvestable Varieties #20240303017NC). Conflict of Interest Disclosure The authors affirm that this research was conducted without any commercial or financial relationships that could be construed as a potential conflict of interest. References Akohoue F., and Miedaner T., 2022, Meta-analysis and co-expression analysis revealed stable QTL and candidate genes conferring resistances to Fusarium and Gibberella ear rots while reducing mycotoxin contamination in maize, Frontiers in Plant Science, 13: 1050891. https://doi.org/10.3389/fpls.2022.1050891 Bhattramakki D., Dolan M., Hanafey M., Wineland R., Vaske D., Register J., Tingey S., and Rafalski A., 2002, Insertion-deletion polymorphisms in 3’ regions of maize genes occur frequently and can be used as highly informative genetic markers, Plant Molecular Biology, 48: 539-547. https://doi.org/10.1023/A:1014841612043 Clark R., Tavaré S., and Doebley J., 2005, Estimating a nucleotide substitution rate for maize from polymorphism at a major domestication locus, Molecular Biology and Evolution, 22(11): 2304-2312. https://doi.org/10.1093/molbev/msi228 Clevenger J., Chavarro C., Pearl S., Ozias‐Akins P., and Jackson S., 2015, Single nucleotide polymorphism identification in polyploids: a review, example, and recommendations, Molecular Plant, 8(6): 831-846. https://doi.org/10.1016/j.molp.2015.02.002 Dong Z., Wang Y., Bao J., Li Y., Yin Z., Long Y., and Wan X., 2023, The genetic structures and molecular mechanisms underlying ear traits in maize (Zeamays L.), Cells, 12(14): 1900. https://doi.org/10.3390/cells12141900 Duran C., Appleby N., Clark T., Wood D., Imelfort M., Batley J., and Edwards D., 2008, AutoSNPdb: an annotated single nucleotide polymorphism database for crop plants, Nucleic Acids Research, 37: D951-D953. https://doi.org/10.1093/nar/gkn650 Fang Z., Pyhäjärvi T., Weber A., Weber A., Dawe R., Glaubitz J., González J., Ross-Ibarra C., Doebley J., Morrell P., and Ross-Ibarra J., 2012, Megabase-scale inversion polymorphism in the wild ancestor of maize, Genetics, 191: 883-894. https://doi.org/10.1534/genetics.112.138578 Farfan I., Fuente G., Murray S., Isakeit T., Huang P., Warburton M., Williams P., Windham G., and Kolomiets M., 2015, Genome wide association study for drought, aflatoxin resistance, and important agronomic traits of maize hybrids in the sub-tropics, PLoS One, 10(2): e0117737. https://doi.org/10.1371/journal.pone.0117737 Flowers J., Molina J., Rubinstein S., Huang P., Schaal B., and Purugganan M., 2012, Natural selection in gene-dense regions shapes the genomic pattern of polymorphism in wild and domesticated rice, Molecular Biology and Evolution, 29(2): 675-687. https://doi.org/10.1093/molbev/msr225 Ganal M., Altmann T., and Röder M., 2009, SNP identification in crop plants, Current Opinion in Plant Biology, 12(2): 211-217. https://doi.org/10.1016/j.pbi.2008.12.009 Goddard M., Kemper K., Macleod I., Chamberlain A., and Hayes B., 2016, Genetics of complex traits: prediction of phenotype, identification of causal polymorphisms and genetic architecture, Proceedings of the Royal Society B: Biological Sciences, 283(1835): 20160569. https://doi.org/10.1098/rspb.2016.0569 Hansey C., Vaillancourt B., Sekhon R., León N., Kaeppler S., Buell C., and Moustafa A., 2012, Maize (Zea mays L.) genome diversity as revealed by RNA-sequencing, PLoS One, 7(3): e33071. https://doi.org/10.1371/journal.pone.0033071
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