International Journal of Marine Science, 2016, Vol.6, No.21, 1-20
20
Package. R package version 2.0-10. 2013;http://CRAN.R-project.org/package=vegan.
Palandro D.A., Andréfouët S., Hu C., Hallock P., Müller-Karger F.E., and Dustan P., 2008, Quantification of two decades of shallow-water coral reef habitat
decline in the Florida Keys National Marine Sanctuary using Landsat data (1984-2002). Remote Sensing of the Environment. 8(112): 3388-3399.
Palumbi S.R., Barshis D.J., Traylor-Knowles N., and Bay R.A., 2014, Mechanisms of reef coral resistance to future climate change. Science. 344(6186):
895-898.
Pandolfi J.M., Jackson J.B.C., Baron N., Bradbury R.H., Guzman H.M., Hughes T.P., et al., 2005, Are U.S. coral reefs on the slippery slope to slime? Science.
307(5716): 1725-1726.
Patterson K.L., Porter J.W., Ritchie K.B., Polson S.W., Mueller E., Peters E.C., et al., 2002, The etiology of white pox, a lethal disease of the Caribbean elkhorn
coral, Acropora palmata. Proceedings of the National Academy of Science. 99: 8725-8730.
R Core Team. R: A language and environment for statistical
Roberts H.H., Rouse L.J., Walker N.D., and Hudson J.H., 1982, Coldwater stress in Florida Bay and northern Bahamas: a product of winter cold-air outbreaks.
Journal of Sediment Petroleum. 52: 145-155.
Ruzicka R.R., Colella M.A., Porter J.W., Morrison J.M., Kidney J.A., Brinkhuis V., et al., 2013, Temporal changes in benthic assemblages on Florida Keys reefs
11 years after the 1997/1998 El Nino. Marine Ecology Progress Series. 489: 125-141.
Sammarco P.W., and Andrews J.C., 1989, The helix experiment: differential localized dispersal and recruitment patterns in Great Barrier Reef corals.
Limnology and Oceanography. 34(5): 896-912.
Schmidt-Roach S., Kunzmann A., and Arbizu P.M., 2008, In situ observation of coral recruitment using fluorescence census techniques. Journal of
Experimental Marine Biology and Ecology. 367(1): 37-40.
Schutte V.G.W., Selig E.R., and Bruno J.F., 2010, Regional spatio-temporal trends in Caribbean coral reef benthic communities. Marine Ecology Progress Series.
402: 115-122.
Shearer T.L., and Coffroth M.A., 2006, Genetic identification of Caribbean scleractinian coral recruits at the Flower Garden Banks and the Florida Keys.
Marine Ecological Progress Series. 306: 133-142.
Shinn E.A., Reich C.D., Hickey T.D., and Lidz B.H., 2003, Staghorn tempestites in the Florida Keys. Coral Reefs. 22: 91-97.
Siebeck U.E., Marshall N.J., Klüter A., and Hoegh-Guldberg O, 2006, Monitoring coral bleaching using a color reference card. Coral Reefs 25: 453-460.
Springer, New York
Soto I.M., Muller-Karger F.E., Hallock P., and Hu C., 2011, Sea surface temperature variability in the Florida Keys and its relationship to coral cover. Journal of
Marine Biology. doi:10.1155/2011/981723.
Steneck R.S., Paris C.B., Arnold S.N., Ablan-Lagman M.C., Alcala A.C., Butler M.J., et al., 2009, Thinking and managing outside the box: coalescing
connectivity networks to build region-wide resilience in coral reef ecosystems. Coral Reefs. 28: 367-378.
Strychar K.B., Coates M., Sammarco P.W., and Piva T.J., 2004, Bleaching as a pathogenic response in scleractinian corals, evidenced by high concentrations of
apoptotic and necrotic zooxanthellae. Journal of Experimental Marine Biology and Ecology. 304(1): 99-121.
Sutherland K.P., Shaban S., Joyner J.L., Porter J.W., and Lipp E.K., 2011, Human pathogen shown to cause disease in the threatened elkhorn coral Acropora
palmata. PLoS ONE. 6(8): e23468. doi:10.1371/journal.pone.0023468.
Walker N.D., Roberts H.H., Rouse L.J., and Huh O.K., 1982, Thermal history of reef-associated environments during a record cold-air outbreak event. Coral
Reefs. 1: 83-87.
Wickham H. ggplot2: elegant graphics for data analysis. 2009.
Ziemann D.A., Walsh, W.A., Saphore E.G., Fulton-Bennett K., 1992, A survey of water quality characteristics of effluent from Hawaiian aquaculture facilities.
Journal of the World of Aquaculture Society. 23(3): 180-191.