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Computational Molecular Biology 2014, Vol. 4, No. 9, 1-6
http://cmb.biopublisher.ca
6
Figure 2 Plant Transcription Factor Result of
Trigonella
foenum-graecum L.
rapid sequencing and characterization of transcriptomes,
expressed sequence data are still not available for many
organisms, including many crop plants. In this study,
we performed de novo functional annotation of five
different legume species without considering any
reference species with significant non-redundant set
transcripts. The detailed analyses of the data set has
provided several important features of five species
such as GC content, conserved genes across legumes
and other plant species, assignment of functional
categories by GO terms and identification of SSRs by
MISA tool. It is noted that this comparative study of
five different legume species which are
Arachis
hypogaea
L.
, Cicer arietinum
L.
, Phaseolus vulgaris
L.
,
Trigonella foenum-graecum
L.
and
Vicia sativa
L. will
be useful for further functional genomics studies as it
includes useful information of each species with full
annotation.
Acknowledgement
We are heartily thankful to Prof. (Dr.) P.V. Virparia, Director,
GDCST, Sardar Patel University, Vallabh Vidyanagar, for
providing us facilities for the research work.
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