Basic HTML Version
Tree Genetics and Molecular Breeding 2012, Vol.2, No.2, 8
-
14
http://tgmb.sophiapublisher.com
10
Table 1 The numbers of nucleotide substitution in ITS sequences in genus
Buxus
Note: Tran 1 stands for base transition numbers; Tran 2 stands for base transversion numbers
Table 2 The ratio of nucleotide substitution of ITS sequences
in
Buxus
Name of Species
ITS
-
1
ITS
-
2
ITS
-
3
ITS
-
4
J&C
K
J&C
K
J&C
K
J&C
K
Buxus sinicavar. Parvifolia
A
0.5269
0.5404
0.2349 0.2402
0.0317 0.0318
0.2714
0.2747
Buxus sinicavar. Parvifolia
B
0.5350
0.5441
0.2292 0.2340
0.0317 0.0318
0.2714
0.2745
Buxus sinicavar. Parvifolia
C
0.5431
0.5520
0.2292 0.2340
0.0317 0.0318
0.2736
0.2766
Buxus sinicavar. Parvifolia
D
0.5116
0.5258
0.2292 0.2340
0.0317 0.0318
0.2613
0.2652
Buxus sinicavar. Parvifolia
E
0.5199
0.5339
0.2349 0.2395
0.0317 0.0318
0.2658
0.2695
Buxus henryi
0.5034
0.5163
0.2315 0.2360
0.0317 0.0318
0.2599
0.2634
Buxus bodinieri
0.5109
0.5221
0.2596 0.2666
0.0317 0.0318
0.2401
0.2424
Buxus harlandii
0.5299
0.5408
0.2361 0.2414
0.0317 0.0318
0.2724
0.2759
Buxus sinica
0.5751
0.5835
0.2407 0.2466
0.0317 0.0318
0.2840
0.2872
Buxus microphyllavar. japonica
0.6161
0.6222
0.2407 0.2473
0.0317 0.0318
0.2918
0.2948
Buxus riparia
0.6161
0.6222
0.2396 0.2467
0.0317 0.0318
0.2918
0.2948
Buxus liukiuensis
0.6497
0.6593
0.2361 0.2414
0.0317 0.0318
0.2976
0.3007
Buxus sempervirens
0.4361
0.4435
0.2029 0.2050
0.0317 0.0318
0.2407
0.2432
Buxus balearica
0.4006
0.4043
0.2443 0.2497
0.0317 0.0318
0.2401
0.2424
Buxus glomerata
0.5414
0.5579
0.3742 0.3828
0.1130 0.1146
0.3450
0.3519
Buxus gonoclada
0.5188
0.5363
0.3432 0.3562
0.0780 0.0785
0.3227
0.3307
Buxus citrifolia
0.4691
0.4806
0.3557 0.3690
0.1130 0.1156
0.3227
0.3310
Buxus macowanii
0.6566
0.6685
0.2723 0.2769
0.0382 0.0384
0.2635
0.2662
Note: J&C: The result based on Juks&Cantor’s one parameter model; K: The result based on Kimura’s two parameter model
Name of Species
ITS
-
1
ITS
-
2
5.8S
ITS
Tran 1 Tran 2 Total Tran 1 Tran 2 Total Tran 1 Tran 2 Total Tran 1 Tran 2 Total
Buxus sinica
var.
parvifolia
A
49
46
95 31
17
48 3
2
5
80
68
148
Buxus sinica
var.
parvifolia
B
46
50
96 30
17
47 3
2
5
79
69
148
Buxus sinica
var.
parvifolia
C
46
51
97 30
17
47 3
2
5
79
70
149
Buxus sinica
var.
parvifolia
D
47
42
89 30
17
47 3
2
5
80
61
141
Buxus sinica
var.
parvifolia
E
47
43
90 30
18
48 3
2
5
80
63
143
Buxus henryi
46
42
88 30
18
48 3
2
5
79
62
141
Buxus bodinieri
47
46
93 34
18
52 3
2
5
72
63
135
Buxus harlandii
47
48
95 31
17
48 3
2
5
81
67
148
Buxus sinica
45
53
98 32
17
49 3
2
5
80
72
152
Buxus microphylla
var.
japonica
43
57
100 33
16
49 3
2
5
79
75
154
Buxus riparia
43
57
100 33
15
48 3
2
5
79
75
154
Buxus liukiuensis
46
57
103 31
17
48 3
2
5
80
76
156
Buxus sempervirens
42
41
83 18
14
32 3
2
5
72
61
133
Buxus balearica
38
43
81 31
18
49 3
2
5
72
63
135
Buxus glomerata
48
43
91 37
29
66 12
5
17 96
76
172
Buxus gonoclada
48
40
88 42
23
65 8
4
12 99
67
166
Buxus citrifolia
44
39
83 42
24
66 14
3
17 100
66
166
Buxus macowanii
32
38
70 29
21
50 4
2
6
63
57
120