Triticeae Genomics and Genetics, 2024, Vol.15, No.1, 31-43 http://cropscipublisher.com/index.php/lgg 42 Middleton C.P., Stein N., Keller B., Kilian B., and Wicker T., 2013, Comparative analysis of genome composition in Triticeae reveals strong variation in transposable element dynamics and nucleotide diversity, The Plant Journal, 73(2): 347-356. https://doi.org/10.1111/tpj.12048 PMid:23057663 Oggenfuss U., and Croll D., 2023, Recent transposable element bursts are associated with the proximity to genes in a fungal plant pathogen, PLoS Pathogens, 19(2): e1011130. https://doi.org/10.1371/journal.ppat.1011130 PMid:36787337 PMCid:PMC9970103 Oggenfuss U., Badet T., Wicker T., Hartmann F., Singh N., Abraham L., Karisto P., Vonlanthen T., Mundt C., McDonald B., and Croll D., 2021, A population-level invasion by transposable elements triggers genome expansion in a fungal pathogen, Elife, 10: e69249. https://doi.org/10.7554/eLife.69249 PMid:34528512 PMCid:PMC8445621 Papon N., Lasserre‐Zuber P., Rimbert H., De Oliveira R., Paux E., and Choulet F., 2023, All families of transposable elements were active in the recent wheat genome evolution and polyploidy had no impact on their activity, The Plant Genome, 16(3): e20347. https://doi.org/10.1002/tpg2.20347 PMid:37243411 Quesneville H., 2020, Twenty years of transposable element analysis in the Arabidopsis thaliana genome, Mobile DNA, 11(1): 28. https://doi.org/10.1186/s13100-020-00223-x PMid:32742313 PMCid:PMC7385966 Raskina O., 2018, Transposable elements in the organization and diversification of the genome of Aegilops speltoides Tausch (Poaceae, Triticeae), International Journal of Genomics, 2018. https://doi.org/10.1155/2018/4373089 PMid:30356408 PMCid:PMC6178165 Sabot F., and Schulman A.H., 2009, Genomics of transposable elements in the Triticeae, In: Muehlbauer G.J., and Feuillet C. (eds), Genetics and genomics of the Triticeae, Springer, US, pp.387-405. https://doi.org/10.1007/978-0-387-77489-3_14 Stitzer M.C., Anderson S.N., Springer N.M., and Ross-Ibarra J., 2021, The genomic ecosystem of transposable elements in maize, PLoS Genetics, 17(10): e1009768. https://doi.org/10.1371/journal.pgen.1009768 PMid:34648488 PMCid:PMC8547701 Tan S., Ma H., Wang J., Wang M., Wang M., Yin H., Zhang Y., Zhang X., Shen J., Wang D., Banes G., Zhang Z., Wu J., Huang X., Chen H., Ge S., Chen C., and Zhang Y., 2021, DNA transposons mediate duplications via transposition-independent and-dependent mechanisms in metazoans, Nature Communications, 12(1): 4280. https://doi.org/10.1038/s41467-021-24585-9 Thiyagarajan K., Latini A., Cantale C., Porceddu E., and Galeffi P., 2022, Identification and evolutionary analysis of a Triticeae tribe specific novel non-autonomous DNA transposon in DREB related Dehydration Responsive Factor1 gene, bioRxiv, 2022-03. https://doi.org/10.1101/2022.03.05.482545 Ubi B.E., Gorafi Y.S.A., Yaakov B., Monden Y., Kashkush K., and Tsujimoto H., 2022, Exploiting the miniature inverted-repeat transposable elements insertion polymorphisms as an efficient DNA marker system for genome analysis and evolutionary studies in wheat and related species, Frontiers in Plant Science, 13: 995586. https://doi.org/10.3389/fpls.2022.995586 PMid:36119578 PMCid:PMC9479669 Ventimiglia M., Marturano G., Vangelisti A., Usai G., Simoni S., Cavallini A., Giordani T., Natali L., Zuccolo A., and Mascagni F., 2023, Genome-wide identification and characterization of exapted transposable elements in the large genome of sunflower (Helianthus annuus L.), The Plant Journal, 113(4): 734-748. https://doi.org/10.1111/tpj.16078 PMid:36573648 Wells J.N., and Feschotte C., 2020, A field guide to eukaryotic transposable elements, Annual review of genetics, 54: 539-561. https://doi.org/10.1146/annurev-genet-040620-022145 PMid:32955944 PMCid:PMC8293684 Wicker T., Gundlach H., Spannagl M., Uauy C., Borrill P., Ramirez-Gonzalez R., Oliveira R.H., Mayer K., Paux E., and Choulet F., 2018, Impact of transposable elements on genome structure and evolution in bread wheat, Genome Biology, 19: 1-18. https://doi.org/10.1186/s13059-018-1479-0 PMid:30115100 PMCid:PMC6097303
RkJQdWJsaXNoZXIy MjQ4ODYzNQ==