Rice Genomics and Genetics 2024, Vol.15, No.6, 277-286 http://cropscipublisher.com/index.php/rgg 281 Figure 2 Gene module analysis (Adopted from Zhou et al., 2022) Image caption: (A) module hierarchical clustering diagram. Dynamic Tree Cut was used to divide modules according to clustering results. Merged Dynamics was used for module division after merging the modules with similar expression patterns according to the module similarity, and the subsequent analysis was carried out according to the merged modules; (B) histogram of the number of genes in each module. The horizontal axis represents each module, and the vertical axis represents the number of genes; (C) modular gene correlation heatmap. Each row and column represents a gene, and the darker the color of each point (white→yellow→red) represents stronger connectivity between the two genes corresponding to the row and column, that is, the stronger the Pearson correlation. (D) correlation graph of trait association. The abscissa is the trait, and the ordinate is the module. Red represents a positive correlation, and green represents a negative correlation; the darker the color is, the stronger the correlation. The number in the brackets represents a significant p-value, where the smaller the value is, the stronger the significance (Adopted from Zhou et al., 2022)
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