RGG_2024v15n3

Rice Genomics and Genetics 2024, Vol.15, No.3, 94-105 http://cropscipublisher.com/index.php/rgg 105 Wang M., Yu Y., Haberer G., Marri P., Fan C., Goicoechea J., Zuccolo A., Song X., Kudrna D., Ammiraju J., Cossu R., Maldonado C., Chen J., Lee S., Sisneros N., Baynast K., Golser W., Wissotski M., Kim W., Sanchez P., Ndjiondjop M., Sanni K., Long M., Carney J., Panaud O., Wicker T., Machado C., Chen M., Mayer K., Rounsley S., and Wing R., 2014, The genome sequence of African rice (Oryza glaberrima) and evidence for independent domestication, Nature Genetics, 46: 982-988. https://doi.org/10.1038/ng.3044 Wang Z., Sécond G., and Tanksley S., 1992, Polymorphism and phylogenetic relationships among species in the genus Oryza as determined by analysis of nuclear RFLPs, Theoretical and Applied Genetics, 83: 565-581. https://doi.org/10.1007/BF00226900 Wu C., Cheng Z., Huang X., Yin S., Cao K., and Sun C., 2004, Genetic diversity among and within populations of Oryza granulata from Yunnan of China revealed by RAPD and ISSR markers: implications for conservation of the endangered species, Plant Science, 167: 35-42. https://doi.org/10.1016/J.PLANTSCI.2004.02.022 Xu X., Meng Q., Geng M., Ren N., Zhou L., Du Y., Cai Z., Wang M., Wang X., Wang X., Han J., Jiang S., Jing C., Liu R., Zheng X., Yang Q., Zhang F., and Ge S., 2020, Divergence in flowering time is a major component contributing to reproductive isolation between two wild rice species (Oryza rufipogon and O. nivara), Science China Life Sciences, 63: 1714-1724. https://doi.org/10.1007/s11427-019-1678-6 Yang J., Vázquez L., Chen X., Li H., Zhang H., Liu Z., and Zhao G., 2017, Development of Chloroplast and Nuclear DNA Markers for Chinese Oaks (Quercus Subgenus Quercus) and Assessment of Their Utility as DNA Barcodes, Frontiers in Plant Science, 8: 66. https://doi.org/10.3389/fpls.2017.00816 Zhang L., and Ge S., 2006, Multilocus analysis of nucleotide variation and speciation in Oryza officinalis and its close relatives, Molecular Biology and Evolution, 24(3): 769-783. https://doi.org/10.1093/MOLBEV/MSL204 Zhu Q., and Ge S., 2005, Phylogenetic relationships among A-genome species of the genus Oryza revealed by intron sequences of four nuclear genes, The New Phytologist, 167(1): 249-265. https://doi.org/10.1111/J.1469-8137.2005.01406.X Zhu T., Xu P., Liu J., Peng S., Mo X., and Gao L., 2014, Phylogenetic relationships and genome divergence among the AA- genome species of the genus Oryza as revealed by 53 nuclear genes and 16 intergenic regions, Molecular Phylogenetics and Evolution, 70: 348-361. https://doi.org/10.1016/j.ympev.2013.10.008

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