MGG_2024v15n3

Maize Genomics and Genetics 2024, Vol.15, No.3, 123-135 http://cropscipublisher.com/index.php/mgg 134 Hirsch C., and Springer N., 2017, Transposable element influences on gene expression in plants, biochimica et biophysica acta, Gene Regulatory Mechanisms, 1860(1): 157-165. https://doi.org/10.1016/j.bbagrm.2016.05.010 PMid:27235540 Klein S., and O'Neill R., 2018, Transposable elements: genome innovation, chromosome diversity, and centromere conflict, Chromosome Research, 26: 5-23. https://doi.org/10.1007/s10577-017-9569-5. PMid:29332159 PMCid:PMC5857280 Mhiri C., Borges F., and Grandbastien M., 2022, Specificities and dynamics of transposable elements in land plants, Biology, 11(4): 488. PMid:35453688 PMCid:PMC9033089 Nishihara H., 2019, Transposable elements as genetic accelerators of evolution: contribution to genome size, gene regulatory network rewiring and morphological innovation, Genes and Genetic Systems, 94(6): 269-281. https://doi.org/10.1266/ggs.19-00029 PMid:31932541 Noshay J., Marand A., Anderson S., Zhou P., Guerra M., Lu Z., O'Connor C., Crisp P., Hirsch C., Schmitz R., and Springer N., 2020, Assessing the regulatory potential of transposable elements using chromatin accessibility profiles of maize transposons., Genetics, 217(1): 1-13. https://doi.org/10.1093/genetics/iyaa003 PMid:33683350 PMCid:PMC8552484 Oggenfuss U., and Croll D., 2023, Recent transposable element bursts are associated with the proximity to genes in a fungal plant pathogen, PLOS Pathogens, 19(2): e1011130. https://doi.org/10.1371/journal.ppat.1011130 PMid:36787337 PMCid:PMC9970103 Panda K., Slotkin R., and Slotkin R., 2020, Long-read cDNA sequencing enables a "gene-like" transcript annotation of transposable elements, Plant Cell, 32: 2687-2698. https://doi.org/10.1105/tpc.20.00115 PMid:32647069 PMCid:PMC7474280 Pimpinelli S., and Piacentini L., 2020, Environmental change and the evolution of genomes: transposable elements as translators of phenotypic plasticity into genotypic variability, Functional Ecology, 34: 428-441. https://doi.org/10.1111/1365-2435.13497 Platt R., Vandewege M., and Ray D., 2018, Mammalian transposable elements and their impacts on genome evolution, Chromosome Research, 26: 25-43. https://doi.org/10.1007/s10577-017-9570-z. PMid:29392473 PMCid:PMC5857283 Qiu Y., O'Connor C., Coletta R., Renk J., Monnahan P., Noshay J., Liang Z., Gilbert A., Anderson S., McGaugh S., Springer N., and Hirsch C., 2021, Whole-genome variation of transposable element insertions in a maize diversity panel, G3: Genes|Genomes|Genetics, 11(10): p.jkab238. https://doi.org/10.1093/g3journal/jkab238. PMid:34568911 PMCid:PMC8473971 Razali N., Cheah B., and Nadarajah K., 2019, Transposable elements adaptive role in genome plasticity, pathogenicity and evolution in fungal phytopathogens, International Journal of Molecular Sciences, 20(14): 3597. https://doi.org/10.3390/ijms20143597 PMid:31340492 PMCid:PMC6679389 Rebollo R., Romanish M., and Mager D., 2012, Transposable elements: an abundant and natural source of regulatory sequences for host genes, Annual Review of Genetics, 46: 21-42. https://doi.org/10.1146/annurev-genet-110711-155621 PMid:22905872 Romano N., and Fanti L., 2022, Transposable elements: major players in shaping genomic and evolutionary patterns, Cells, 11(6): 1048. https://doi.org/10.3390/cells11061048. PMid:35326499 PMCid:PMC8947103 Schrader L., and Schmitz J., 2018, The impact of transposable elements in adaptive evolution, Molecular Ecology, 28: 1537-1549. https://doi.org/10.1111/mec.14794. PMid:30003608 Serrato-Capuchina A., and Matute D., 2018, The role of transposable elements in speciation, Genes, 9(5): 254. https://doi.org/10.3390/genes9050254 Sharma S., and Peterson T., 2022, Complex chromosomal rearrangements induced by transposons in maize, Genetics, 223(2): iyac124. https://doi.org/10.1093/genetics/iyac124. PMid:36111993 PMCid:PMC9910405 Sotero-Caio C., Platt R., Suh A., and Ray D., 2017, Evolution and diversity of transposable elements in vertebrate genomes, Genome Biology and Evolution, 9: 161-177. https://doi.org/10.1093/gbe/evw264 PMid:28158585 PMCid:PMC5381603

RkJQdWJsaXNoZXIy MjQ4ODYzNQ==