MGG_2024v15n1

Maize Genomics and Genetics 2024, Vol.15, No.1, 18-26 http://cropscipublisher.com/index.php/mgg 23 population) and genetic background can lead to false-positive results, in which certain genetic markers are incorrectly associated with traits. This requires researchers to use complex statistical methods to correct the influence of this structure and background to ensure that the results of correlation analysis are accurate and reliable. 4.2 Solutions and technological advancements With the development of bioinformatics and statistical methods, scientists have proposed and implemented multiple strategies to overcome these challenges in GWAS studies. For example, by increasing sample size and utilizing high-throughput sequencing technology, the resolution of GWAS and its ability to discover small effect sites can be improved. In addition, the use of advanced statistical models, such as mixed linear models (MLM) and principal component analysis (PCA), can effectively correct the effects of population structure and genetic background and reduce false positive results. 4.3 Combination of GWAS and other methods GWAS are not the only tool for genetic research. In order to more comprehensively analyze the genetic basis of complex traits, combining GWAS with other methods has become a current research trend. For example, the combination of genomic selection (GS) and gene editing technologies (such as CRISPR-Cas9) with GWAS provides new strategies for improving crop traits. Genomic selection uses all meaningful genetic markers discovered by GWAS to predict and select individuals with excellent traits, which can greatly speed up the breeding process. Gene editing technology can directly and accurately modify the key genes identified by GWAS in the crop genome, thereby directly affecting the target traits. This strategy of combining different methods can not only improve the efficiency and accuracy of crop trait improvement, but also provide new perspectives and tools for future crop genetic improvement (Hua et al., 2019). 5 Future Directions With the widespread application of genome-wide association study (GWAS) technology in the field of crop science, it has shown great potential in corn nutritional improvement. In addition, international cooperation in interdisciplinary integrated research methods and data sharing also provides new perspectives and approaches for corn genetic improvement. Below is a detailed discussion of these future directions. 5.1 The potential of GWAS in corn nutritional improvement GWAS technology has revealed many key genetic loci and genes that affect the nutritional quality traits of corn through association analysis. These findings provide the molecular basis for nutritional improvement of corn (Huang and Han, 2014). For example, genetic loci affecting protein content, oil content, and vitamin and mineral content discovered through GWAS can be used as molecular markers in corn breeding to selectively increase the content of these nutrients. As more and more genetic factors affecting the nutritional quality of corn are discovered, the application of GWAS technology in corn nutritional improvement will become more extensive and precise. 5.2 Interdisciplinary and integrated research methods Research on corn nutritional improvement is not just a challenge of a single discipline, but requires the joint efforts of multiple disciplines such as botany, genetics, molecular biology, and bioinformatics (Buckler et al., 2009). Interdisciplinary integrated research methods will promote a deep understanding of the genetic basis of corn nutritional quality from different perspectives and discover new ways to improve it. For example, combining GWAS and transcriptomic analysis can help researchers not only discover genetic variants that affect nutritional quality, but also further explore how these variants affect gene expression. In addition, the application of bioinformatics tools to integrate and analyze large amounts of genetic and phenotypic data will accelerate the progress of corn nutritional improvement research. 5.3 Importance of data sharing and international cooperation Globally, maize varieties from different regions exhibit rich genetic diversity. These diversity are indispensable resources for nutritional improvement of corn. Therefore, data sharing and international cooperation are particularly important in research on corn nutritional improvement (Morris et al., 2013). By sharing the large amounts of genetic and phenotypic data generated in GWAS studies, researchers can draw on a wider range of

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