! ! Legume Genomics and Genetics 2025, Vol.16, No.1, 1-10 http://cropscipublisher.com/index.php/lgg! ! 6! Table 1 The genes within 50 kb genomic region of the top 28 significant SBR-associated SNPs with functional annotations (Adopted from Xiong et al., 2023) SNP GWAS model (Ranking) LOD Allele Type Gene name Functional annotations Gm02_7235181 SUPER(1), FarmCPU, CMLM(5), MLMM(10) 7.91 T/C Glyma.02G083500 Glyma.02G083300 Glyma.02G084100 LRR; RCC1; response to bacterial origin; defense response; structural constituent of cell wall Gm02_7234594 SUPER(2), MLMM(11) 7.61 C/T Gm02_7315227 SUPER(3), GLM, MLM, Blink(5), MLMM(6) 7.52 G/A Glyma.02G084100 Glyma.02G084900 RCC1 repeat; Ankyrin repeat family protein/domain Gm03_38913029 GLM, MLM, Blink (2), FarmCPU, CMLM(3), MLMM(7), GLM 6.85 T/C Glyma.03G175800 Glyma.03G177400 Glyma.03G175300 Response to aluminum ion; cell wall; ABC transporter Gm04_45884688 MLM, Blink(7), SUPER(15), MLMM(16), FarmCPU, CMLM(26) 6.23 T/C Glyma.04g188000 LRR Gm04_46003059 SUPER(20), MLMM(24) 6.03 G/A Glyma.04G189300, Glyma.04g189500 Membrane; Cytochrome P450 Gm04_46295839 SUPER(16), MLMM(18) 6.08 C/T Glyma.04G192300 Cell wall organization; cllular membrane fusion; Gm04_46389651 SUPER(22), MLMM(27) 5.94 C/T Gm04_47132429 MLMM(4), FarmCPU, CMLM(6), GLM, MLM, Blink(13), SUPER(25) 5.78 T/C Glyma.04G211100, Glyma.04G212000 NAC domain Gm06_36808946 SUPER(6), GLM, MLM, Blink(9), FarmCPU, CMLM(34) 6.73 G/A Glyma.06G232500 Response to molecule of bacterial origin Gm08_43955878 FarmCPU, CMLM(19), SUPER(32), MLMM(33) 5.61 A/C Glyma.08g319300, Glyma.08G321700 LRR; response to abscisic acid stimulus/cold/water deprivation Gm09_1944730 MLMM(2), SUPER(27) 5.77 C/A Glyma.09G024700 LRR-RLKs Gm09_1943831 MLMM(3), SUPER(28) 5.73 G/A Gm09_1951644 FarmCPU, CMLM, MLMM(1), GLM, MLM, Blink(4), SUPER(18) 10.07 T/G Gm10_5573877 SUPER(5), MLMM(12), GLM, MLM, Blink(14) 6.73 C/T Glyma.10G060100, Glyma.10G060200, Glyma.10G060600 Respiratory burst involved in defense response, response to bacterium/chitin; cell wall organization Gml0_5573007 SUPER(7), MLMM(15) 6.58 C/T Gml0_5559592 SUPER(9), MLMM(20) 6.48 C/A Gm10_ 5541691 SUPER(33), MLMM(44) 5.60 C/T Gm10_5578693 SUPER(23), MLMM(32) 5.93 G/A Gml0_39142024 GLM, MLM, Blink(1), MLMM(8), SUPER(10), FarmCPU, CMLM(14) 7.12 C/T Glyma.10g157500 LRR-RLKs, regulation of plant immunity Gm10_39147121 MLMM(9), SUPER(21) 6.02 T/G Gm12_28136735 SUPER(4), GLM, MLM, Blink(8), MLMM(39) 7.03 G/A Glyma.12G160100, Glyma.12G160400 NAC domain protein; Cytochrome P450 Gm13_16350701 FarmCPU, CMLM(16), GLM, MLM, Blink(23), SUPER(29) 5.63 T/C Glyma.13G064500 F-box and WD40 domain protein, disease resistance protein Gm14_2492139 GLM, MLM, Blink(6), SUPER(13), FarmCPU, CMLM(25), MLMM(26) 6.26 A/C Glyma.14G034200, Glyma.14G040000 RCC1 family protein; LRR-RLKs Gm14_6185611 MLMM(28), SUPER(36), GLM, MLM, Blink(46) 5.51 C/T Glyma.14g073300, Glyma.14G073800 F-box domain; regulation of defense response
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