LGG_2024v15n1

2 Historical Context of Fabaceae Phylogeny	31
2.1 Early studies	31
2.2 Development of phylogenomics	31
3 Methodological Advances in Phylogenomics	31
3.1 High-throughput sequencing technologies	31
3.2 Bioinformatics tools and pipelines	34
3.3 Comparative genomics	34
4 Major Findings in Fabaceae Phylogenomics	34
4.1 Phylogenetic relationships	34
4.2 Evolutionary insights	35
4.3 Case studies	35
5 Implications for Understanding Evolutionary Proc	35
5.1 Gene flow and hybridization	35
5.2 Molecular evolution	35
5.3 Biogeography	36
7 Future Directions	37
7.1 Emerging technologies	37
7.2 Integrative approaches	37
7.3 Conservation applications	37
8 Concluding Remarks	37
2 Whole Genome Duplication	41
2.1 Mechanisms of WGD	41
2.2 Evolutionary consequences of WGD	41
3 Historical WGD Events in Legumes	41
3.1 Identification of WGD events in legumes	41
3.2 Case studies of WGD in specific legume lineage	42
4 Impacts of WGD on Legume Diversification	42
4.1 Genetic diversity and evolutionary innovation	42
4.2 Ecological and functional diversification	44
4.3 Agricultural and economic implications	44
5 Comparative Genomics and Phylogenetics of WGD in	44
5.1 Advances in genomic technologies	44
5.2 Phylogenetic relationships and WGD	44
6 Challenges and Future Directions in WGD Research	45
6.1 Current limitations and gaps in knowledge	45
6.2 Future research priorities	45
7 Concluding Remarks	46

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