CGG_2025v16n1

Cotton Genomics and Genetics 2025, Vol.16, No.1, 12-20 http://cropscipublisher.com/index.php/cgg 19 Acknowledgments I extend my sincere thanks to two anonymous peer reviewers for their invaluable feedback on the initial draft of this paper, whose evaluations and suggestions have contributed to the improvement of my manuscript. Conflict of Interest Disclosure The author affirms that this research was conducted without any commercial or financial relationships that could be construed as a potential conflict of interest. References Ahmed A., Khan A., Negm M., Iqbal R., Azhar M., Khan S., and Rana I., 2024, Enhancing cotton resilience to challenging climates through genetic modifications, Journal of Cotton Research, 7(1): 10. https://doi.org/10.1186/s42397-024-00171-4 Erdoğan İ., Cevher-Keskin B., Bilir Ö., Hong Y., and Tör M., 2023, Recent developments in CRISPR/Cas9 genome-editing technology related to plant disease resistance and abiotic stress tolerance, Biology, 12(7): 1037. https://doi.org/10.3390/biology12071037 Gao W., Long L., Tian X., Xu F., Liu J., Singh P., Botella J., and Song C., 2017, Genome editing in cotton with the CRISPR/Cas9 system, Frontiers in Plant Science, 8: 1364. https://doi.org/10.3389/fpls.2017.01364 Guo X., Ullah A., Siuta D., Kukfisz B., and Iqbal S., 2022, Role of WRKY transcription factors in regulation of abiotic stress responses in cotton, Life, 12(9): 1410. https://doi.org/10.3390/life12091410 Hassan A., Ijaz M., Sattar A., Sher A., Ma S., Rasheed I., Saleem M., and Hussain I., 2020, Abiotic stress tolerance in cotton, In: Advances in Cotton Research, Chapter 3, pp.1-18. https://doi.org/10.5772/intechopen.89622 He X., Luo X., Wang T., Liu S., Zhang X., and Zhu L., 2020, GhHB12 negatively regulates abiotic stress tolerance in Arabidopsis and cotton, Environmental and Experimental Botany, 176: 104087. https://doi.org/10.1016/j.envexpbot.2020.104087 Huang G., Huang J., Chen X., and Zhu Y., 2021, Recent advances and future perspectives in cotton research, Annual Review of Plant Biology, 72(1): 437-462. https://doi.org/10.1146/annurev-arplant-080720-113241 Khan Z., Khan S., Ahmed A., Iqbal M., Mubarik M., Ghouri M., Ahmad F., Yaseen S., Ali Z., Khan A., and Azhar M., 2023, Genome editing in cotton: challenges and opportunities, Journal of Cotton Research, 6(1): 3. https://doi.org/10.1186/s42397-023-00140-3 Kilwake J., Umer M., Wei Y., Mehari T., Magwanga R., Xu Y., Hou Y., Wang Y., Shiraku M., Kirungu J., Cai X., Zhou Z., Peng R., and Liu F., 2023, Genome-wide characterization of the SAMS gene family in cotton unveils the putative role of GhSAMS2 in enhancing abiotic stress tolerance, Agronomy, 13(2): 612. https://doi.org/10.3390/agronomy13020612 Kumar M., Prusty M., Pandey M., Singh P., Bohra A., Guo B., and Varshney R., 2023, Application of CRISPR/Cas9-mediated gene editing for abiotic stress management in crop plants, Frontiers in Plant Science, 14: 1157678. https://doi.org/10.3389/fpls.2023.1157678 Kumar R., Das J., Puttaswamy R., Kumar M., Balasubramani G., and Prasad Y., 2024, Targeted genome editing for cotton improvement: prospects and challenges, The Nucleus, 67(1): 181-203. https://doi.org/10.1007/s13237-024-00479-1 Li B., Rui H., Li Y., Wang Q., Alariqi M., Qin L., Sun L., Ding X., Wang F., Zou J., Wang Y., Yuan D., Zhang X., and Jin S., 2019, Robust CRISPR/Cpf1 (Cas12a)‐mediated genome editing in allotetraploid cotton (Gossypium hirsutum), Plant Biotechnology Journal, 17(10): 1862-1864. https://doi.org/10.1111/pbi.13147 Ling P., Ju J., Zhang X., Wei W., Luo J., Li Y., Hai H., Shang B., Cheng H., Wang C., Zhang X., and Su J., 2024, The silencing of GhPIP5K2 and GhPIP5K22 weakens abiotic stress tolerance in upland cotton (Gossypium hirsutum), International Journal of Molecular Sciences, 25(3): 1511. https://doi.org/10.3390/ijms25031511 Liu T., Chen T., Kan J., Yao Y., Guo D., Yang Y., Ling X., Wang J., and Zhang B., 2021, The GhMYB36 transcription factor confers resistance to biotic and abiotic stress by enhancing PR1 gene expression in plants, Plant Biotechnology Journal, 20(4): 722-735. https://doi.org/10.1111/pbi.13751 Long L., Guo D., Gao W., Yang W., Hou L., Ma X., Miao Y., Botella J., and Song C., 2018, Optimization of CRISPR/Cas9 genome editing in cotton by improved sgRNA expression, Plant Methods, 14(1): 85. https://doi.org/10.1186/s13007-018-0353-0 Mubarik M.S., Majeed S., Khan S.H., Du X., Frelichowski J.E., Hinze L., and Azhar M.T., 2021, Reforming cotton genes: from elucidation of DNA structure to genome editing, Turkish Journal of Agriculture and Forestry, 45(6): 691-703. https://doi.org/10.3906/tar-2012-64

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