International Journal of Marine Science, 2025, Vol.15, No.2, 53-64 http://www.aquapublisher.com/index.php/ijms 63 Kundu S., Kang H.E., Kim A.R., Lee S.R., Kim E.B., Amin M.H.F., Andriyono S., Kim H.W., and Kang K., 2024, Mitogenomic characterization and phylogenetic placement of african hind Cephalopholis taeniops: shedding light on the evolution of groupers (Serranidae: Epinephelinae), International Journal of Molecular Sciences, 25(3): 1822. https://doi.org/10.3390/ijms25031822 Li H., Liu Y., Mao M., and Mao Y., 2024, Chromosome-level genome assembly and annotation of the camouflage grouper (Epinephelus polyphekadion), Scientific Data, 11(1): 1353. https://doi.org/10.1038/s41597-024-04212-0 Loh K.H., Poong S.W., Du J.L., Ong J., Zheng X., Li Y., and Hu W., 2024, First record of the blue-and-yellow grouper Epinephelus flavocaeruleus (Lacepède 1802) (Perciformes: Epinephelidae) from the borneo waters malaysia, Zootaxa, 5550(1): 133-144. https://doi.org/10.11646/zootaxa.5550.1.14 Ma K., Craig M., Choat J., and Van Herwerden L., 2016, The historical biogeography of groupers: Clade diversification patterns and processes, Molecular Phylogenetics and Evolution, 100: 21-30. https://doi.org/10.1016/j.ympev.2016.02.012 Ma K., and Craig M., 2018, An inconvenient monophyly: an update on the taxonomy of the groupers (Epinephelidae), Copeia, 106: 443-456. https://doi.org/10.1643/CI-18-055 Marin J., Achaz G., Crombach A., and Lambert A., 2020, The genomic view of diversification, Journal of Evolutionary Biology, 33(10): 1387-1404. https://doi.org/10.1111/jeb.13677 Marques D., Meier J., and Seehausen O., 2019, A combinatorial view on speciation and adaptive radiation, Trends in Ecology and Evolution, 34(6): 531-544. https://doi.org/10.1016/j.tree.2019.02.008 Potkamp G., and Fransen C.H.J.M., 2019, Speciation with gene flow in marine systems, Contributions to Zoology, 88(2): 133-172. https://doi.org/10.1163/18759866-20191344 Qu M., Tang W., Liu Q., Wang D., and Ding S., 2017, Genetic diversity within grouper species and a method for interspecific hybrid identification using DNA barcoding and RYR3 marker, Molecular Phylogenetics and Evolution, 121: 46-51. https://doi.org/10.1016/j.ympev.2017.12.031 Rodríguez R., Hauber R., Scordato M., Symes E., Balakrishnan L., Zonana C., David M., Kopp M., Servedio M., Mendelson T., Safran R., Rodríguez R., Hauber M., Scordato E., Symes L., Balakrishnan C., Zonana D., and Doorn S., 2018, Mechanisms of assortative mating in speciation with gene flow: connecting theory and empirical research, The American Naturalist, 191: 1-20. https://doi.org/10.1086/694889 Roycroft E., Achmadi A., Callahan C.M., Esselstyn J.A., Good J.M., Moussalli A., and Rowe K.C., 2021, Molecular evolution of ecological specialisation: genomic insights from the diversification of murine rodents, Genome Biology and Evolution, 13(7): evab103. https://doi.org/10.1093/gbe/evab103 Sherman K.D., Paris J.R., King R.A., Moore K.A., Dahlgren C.P., Knowles L.C., Stump K., Tyler C.R., and Stevens J., 2020, RAD-seq analysis and in situ monitoring of nassau grouper reveal fine-scale population structure and origins of aggregating fish, Frontiers in Marine Science, 7: 157. https://doi.org/10.3389/fmars.2020.00157 Stryjewski K.F., and Sorenson M.D., 2017, Mosaic genome evolution in a recent and rapid avian radiation, Nature Ecology and Evolution, 1: 1912-1922. https://doi.org/10.1038/s41559-017-0364-7 Thomas J., Thomas J., Touchman J., Blakesley R., Bouffard G., Beckstrom-Sternberg S., Margulies E., Blanchette M., Siepel A., Thomas P., and Green E., 2003, Comparative analyses of multi-species sequences from targeted genomic regions, Nature, 424: 788-793. https://doi.org/10.1038/nature01858 Wang C., Ye P., Liu M., Zhang Y., Feng H., Liu J., Zhou H., Wang J., and Chen X., 2022, Comparative analysis of four complete mitochondrial genomes of epinephelidae (Perciformes), Genes, 13(4): 660 Wang D., Chen X., Zhang X., Li J., Yi Y., Bian C., Shi Q., Lin H., Li S., Zhang Y., and You X., 2019, Whole genome sequencing of the giant grouper (Epinephelus lanceolatus) and high-throughput screening of putative antimicrobial peptide genes, Marine Drugs, 17(9): 503. https://doi.org/10.3390/md17090503 Wang Y., Chen Q., Deng C., Zheng Y., and Sun F., 2020, KmerGO: a tool to identify group-specific sequences with k-mers, Frontiers in Microbiology, 11: 2067. https://doi.org/10.3389/fmicb.2020.02067 Weng Z., Yang Y., Wang X., Wu L., Hua S., Zhang H., and Meng Z., 2021, Parentage analysis in giant grouper (Epinephelus lanceolatus) using microsatellite and SNP markers from genotyping-by-sequencing data, Genes, 12(7): 1042. https://doi.org/10.3390/genes12071042 Yang Y., Wang T., Chen J., Wu L., Wu X., Zhang W., Luo J., Xia J., Meng Z., and Liu X., 2021, Whole‐genome sequencing of brown‐marbled grouper (Epinephelus fuscoguttatus) provides insights into adaptive evolution and growth differences, Molecular Ecology Resources, 22: 711-723. https://doi.org/10.1111/1755-0998.13494 Yang Y., Zeng L., Wang T., Wu L., Wu X., Xia J., Meng Z., and Liu X., 2023, Assembly of genome and resequencing provide insights into genetic differentiation between parents of Hulong hybrid grouper (Epinephelus fuscoguttatus ♀× E. lanceolatus ♂), International Journal of Molecular Sciences, 24(15): 12007. https://doi.org/10.3390/ijms241512007
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