10 - IJMEB-Vol.02-No.01页

基本HTML版本

Intl. J. of Mol. Evol. and Biodivers. 2012, Vol. 2, No.1, 1-7
http://ijmeb.sophiapublisher.com
7
higher eukaryotes, EMBO Reports, 5(3): 274-279 http://dx.doi.org/
10.1038/sj.embor.7400096 PMid:14968135 PMCid:1299007
Bohlin J., Skjerve E., and Ussery D.W., 2008a, Reliability and applications
of statistical methods based on oligonucleotide frequencies in bacterial
and archaeal genomes, BMC Genomics, 9(1): 1-18 http://dx.doi.org/10.
1186/1471-2164-9-104 PMid:18307761 PMCid:2289816
Bohlin J., Skjerve E., and Ussery D.W., 2008, Investigations of
oligonucleotide usage variance within and between prokaryotes, PLoS
Computational Biology, 4(4): 1-9 http://dx.doi.org/10.1371/journal.
pcbi.1000057 PMid:18421372 PMCid:2289840
Gogarten, P.J., and Townsend J.P., 2005, Horizontal gene transfer, genome
innovation and evolution, Nature Reviews Microbiology 3(9): 679-687
http://dx.doi.org/10.1038/nrmicro1204 PMid:16138096
Mei Y.S., Yang S.X., and Mo B., 2007, An automatic image registration
algorithm based on a novel similarity metric, Chinese Journal of
Scientific Instrument, 28(4): 336-339
Pass G., and Zabih R., 1999, Comparing images using joint histograms,
Multimedia Systems, 7(3): 234-240 http://dx.doi.org/10.1007/s00530
0050125
Phillips G.J., Arnold J., and Ivarie R., 1987, Mono-through hexanucleotide
composition of the Escherichia coli genome: a Markov chain analysis,
Nucleic Acids Research, 15(6): 2611-2626 http://dx.doi.org/10.1093/
nar/15.6.2611 PMid:3550699 PMCid:340672
Qi J., Luo H., and Hao B.L., 2004, CVTree: a phylogenetic tree
reconstruction tool based on whole genomes, Nucleic Acids Research,
32: W45-W47 http://dx.doi.org/10.1093/nar/gkh362 PMid:15215347
PMCid:441500
Sun J.d., Zhao X., and Hao B.L., 2010, Whole-genome based Archaea
phylogeny and taxonomy: a composition vector approach." Chinese
Science Bulletin, 55(22): 2323-2328 http://dx.doi.org/10.1007/s11434
-010-3008-8
Takahashi M., Kryukov K., and Saitou N., 2009, Estimation of bacterial
species phylogeny through oligonucleotide frequency distances,
Genomics, 93(6): 525-533 http://dx.doi.org/10.1016/j.ygeno.2009.01.
009 PMid:19442633
Tyagi A., Bag S.K., Shukla V., Roy S., and Tuli R., 2010, Oligonucleotide
frequencies of barcoding loci can discriminate species across kingdoms,
PloS One, 5(8): 1-9 http://dx.doi.org/10.1371/journal.pone.0012330
PMid:20808837 PMCid:2924895
Wu, M., and Eisen J.A., 2008, A simple, fast, and accurate method of
phylogenomic inference, Genome Biology, 9(10): 1-11 http://dx.doi.
org/10.1186/gb-2008-9-10-r151 PMid:18851752 PMCid:2760878
Xiong Y.Y., Wang J.P., Lan Y.J., Wen M., and Zhang S.H., 2008, The
evolutionary information of the diversity of oligonucleotide frequency of
genomes, Acta scientiarum naturalium universitatis sunyatsen, 47(2): 84-88