Page 16 - Triticeae Genomics and Genetics

Basic HTML Version

Triticeae Genomics and Genetics 2012, Vol.3, No.3, 25
-
37
http://tgg.sophiapublisher.com
37
Gaikwad K., Mohapatra T., and Sharma T.R., 2007, Single-copy genes
define a conserved order between rice and wheat for understanding
differences caused by duplication, deletion, and transposition of genes,
Funct. Integr. Genomics, 7: 17–35 http://dx.doi.org/10.1007/s10142-
006-0033-4
Sorrells M.E., La Rota M., Bermudez-Kandianis C.E., Greene R.A., Kantety
R., Munkvold J.D., Miftahudin, Mahmoud A., Ma X., Gustafson P.J.,
Qi L.L., Echalier B., Gill B.S., Matthews D.E., Lazo G.R., Chao S.,
Anderson O.D., Edwards H., Linkiewicz A.M., Dubcovsky J.,
Akhunov E.D., Dvorak J., Zhang D., Nguyen H.T., Peng J., Lapitan
N.L.V., Gonzalez-Hernandez J.L., Anderson J.A., Hossain K.,
Kalavacharla V., Kianian S.F., Choi D-W., Close T.J., Dilbirligi M.,
Gill K.S., Steber C., Walker-Simmons M.K., McGuire P.E., and
Qualset C.O., 2003, Comparative DNA sequence analysis of wheat and
rice genomes, Genome Res, 13: 1818–1827 PMid:12902377
PMCid:403773
Srinivasachary, Dida M.M., Gale M.D., and Devos K.M., 2007,
Comparative analyses reveal high levels of conserved colinearity
between the finger millet and rice genomes, Theor. Appl. Genet., 115:
489–499 http://dx.doi.org/10.1007/s00122-007-0582-5 PMid:17619853
Tamura K., Peterson D., Peterson N., Stecher G., Nei M., and Kumar S.,
2011, MEGA5: Molecular evolutionary genetics analysis using
maximum likelihood, evolutionary distance, and maximum parsimony
methods, Mol. Biol. Evol., 28(10): 2731-2739 http://dx.doi.org/10.
1093/molbev/msr121 http://dx.doi.org/10.1093/molbev/msr121 PMid:
21546353
Thiel T., Graner A., Waugh R., Grosse I., Close T.J., and Stein N., 2009,
Evidence and evolutionary analysis of ancient whole-genome
duplication in barley predating the divergence from rice, BMC Evol.
Biol., 9: 209-226 http://dx.doi.org/10.1186/1471-2148-9-209 PMid:
19698139 PMCid:2746218
Vogel J.P., Garvin D.F., Leong O.M., and Hayden D.M., 2006,
Agrobacterium–mediated transformation and inbred line development
in the model grass
Brachypodium distachyon
, Plant Cell Tissue Organ
Cult., 85: 199-211
Wei F., Coe E., Nelson W., Bharti A.K., Engler F., Butler E., Kim H.,
Goicoechea J.L., Chen M., Lee S., Fuks G., Sanchez-Villeda H.,
Schroeder S., Fang Z., McMullen M., Davis G., Bowers J.E., Paterson
A.H., Schaeffer M., Gardiner J., Cone K., Messing J., Soderlund C.,
and Wing RA., 2007, Physical and genetic structure of the maize
genome reflects its complex evolutionary history, PLoS Genet., 3: e123
http://dx.doi.org/10.1371/journal.pgen.0030123 PMid:17658954 PMCid:
1934398
Wicker T., Buchmann J.P., and Keller B., 2010, Patching gaps in plant
genomes results in gene movement and erosion of colinearity, Genome
Res., 20: 1229-1237 http://dx.doi.org/10.1101/gr.107284.110 PMid:
20530251 PMCid:2928501
Triticeae Genomics and Genetics Provisional Publishing